Greydon Gilmore

Greydon Gilmore

Electrophysiologist

London Health Sciences Centre

About

Greydon Gilmore obtained a Ph.D. in Biomedical Engineering at Western University (Western thesis repository). His thesis work involved the development of an open-source stereotactic planning software for functional neurosurgery. His primary research interests include cranial electrodes inserted for movement disorders and epilepsy. The goal is to improve surgical targeting accuracy and post-operative localization of electrodes.

Interests
  • deep brain stimulation
  • stereoelectroencephalography
  • medical image processing
  • clinical software development
Education

  • Postdoc in Department of Mathematics, 2022-current

    Western University

  • Ph.D. Biomedical Engineering, 2017-2022

    Western University

  • M.Sc. Neuroscience, 2013-2015

    Western University

  • B.Sc. Neuroscience, 2010-2013

    Carleton University

Skills

Programming

Python, Bash, R, Matlab, git

Neuroimaging

FSL, ANTS, NiftyReg, 3D Slicer

spike
Electrophysiology

Extracellular, LFP

Recent Publications

Juan S. Bottan, Ashwaq Alshahrani, Greydon Gilmore, David A. Steven, Jorge G. Burneo, Jonathan C. Lau, Richard S. McLachlan, Andrew G. Parrent, Keith W. MacDougall, David C. Diosy, Seyed M. Mirsattari, Ana Suller Marti (2023). Lack of spontaneous typical seizures during intracranial monitoring with stereo-electroencephalography. In Epileptic Disorders.

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Yiming Xiao , Greydon Gilmore, Jason Kai, Jonathan C. Lau, Terry Peters, Ali R Khan (2023). A population-averaged structural connectomic brain atlas dataset from 422 HCP-aging subjects. In Data in Brief.

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Alaa Taha, Greydon Gilmore, Mohamad Abbass, Jason Kai, Tristan Kuehn, John Demarco, Geetika Gupta, Chris Zajner, Daniel Cao, Ryan Chevalier, Abrar Ahmed, Ali Hadi, Bradley G Karat, Olivia W Stanley, Patrick J Park, Kayla M Ferko, Dimuthu Hemachandra, Reid Vassallo, Magdalena Jach, Arun Thurairajah, Sandy Wong, Mauricio C Tenorio, Feyi Ogunsanya, Ali R Khan, Jonathan C. Lau (2023). Magnetic resonance imaging datasets with anatomical fiducials for quality control and registration. In Scientific Data.

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Alaa Taha, Greydon Gilmore, Ali R Khan, Jonathan C. Lau (2022). An Indirect Deep Brain Stimulation Targeting Tool Using Salient Anatomical Fiducials. In Neuromodulation.

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Maryam H. Mofrad, Greydon Gilmore, Dominik Koller, Seyed M. Mirsattari, Jorge G. Burneo, David A. Steven, Ali R Khan, Ana Suller Marti, Lyle Muller (2022). Waveform detection by deep learning reveals multi-area spindles that are selectively modulated by memory load. In Elife.

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Dinkar Kulshreshtha, Marcus Pieterman, Greydon Gilmore, Mandar Jog (2022). Optimizing the selection of Parkinson’s disease patients for neuromodulation using the levodopa challenge test. In Journal of Neurology.

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Mohamad Abbass, Greydon Gilmore, Alaa Taha, Ryan Chevalier, Magdalena Jach, Terry M Peters, Ali R Khan, Jonathan C Lau (2022). Application of the anatomical fiducials framework to a clinical dataset of patients with Parkinson’s disease. In Brain Structure and Function.

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Thibault Martin, Greydon Gilmore, Claire Haegelen, Pierre Jannin, John SH Baxter (2021). Adapting the listening time for micro-electrode recordings in deep brain stimulation interventions. In International Journal of Computer Assisted Radiology and Surgery.

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Thibault Martin, Maxime Peralta, Greydon Gilmore, Paul Sauleau, Claire Haegelen, Pierre Jannin, John SH Baxter (2021). Extending convolutional neural networks for localizing the subthalamic nucleus from microelectrode recordings in Parkinson’s disease. In Biomedical Signal Processing and Control.

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Jason Chui, Alex Freytag, Greydon Gilmore, Shalini Dhir, Max Rachinsky, John Murkin (2021). A novel approach of using brachial plexus blockade as an experimental model for diagnosis of intraoperative nerve dysfunction with somatosensory evoked potentials: a blinded proof-of-concept study. In Canadian Journal of Anaesthesia.

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See all publications

Grants

Graduate Student Award

  • Year: 2020-2022
  • Granting Agency: Parkinson’s Society of Canada
  • Amount: $20,000 CAD

Intern Talentedge Program

  • Year: 2017-2019
  • Granting Agency: OCE Talent Edge Internship Program
  • Amount: $60,000 CAD

Graduate Student Award

  • Year: 2017-2019
  • Granting Agency: Parkinson’s Society of Canada
  • Amount: $40,000 CAD

Graduate Student Innovation Scholars

  • Year: 2017
  • Granting Agency: WORLDDiscoveries – Western University
  • Amount: $1,500 CAD

Canadian Graduate Scholarship

  • Year: 2014-2016
  • Granting Agency: Canadian Institute of Health Research
  • Amount: $37,000 CAD

Training

Neurohackademy

  • Year: 2019
  • Institute: University of Washington
  • Website

Deep Learning Reinforcement Learning Summer School

  • Year: 2018
  • Institute: Vector Institute and CIFAR
  • Website

Intraoperative Neurophysiological Monitoring Course

  • Year: 2017
  • Institute: Greenville Neuromodulation Centre
  • Website

Recent Posts

Making PDFs Searchable
I make use of the advanced search feature in Zotereo frequently, which enables searching through manuscript PDFs. However, when you obtain manuscript PDF files from online databases, they may not be in a searchable format.
Greydon Gilmore
Last updated on Feb 1, 2022
Freesurfer Installation
Download software Download the linux software version. Run the following command: sudo tar -C /usr/local -xzvf /mnt/c/Users/*[your_username]*/Downloads/freesurfer-Linux-centos6_x86_64-stable-pub-v6.0.0.tar.gz You will also need to install some dependancies: sudo apt-get install tcsh sudo apt-get install libglu1 sudo apt-get install libxss1 Post-Install Configurations Add Freesurfer to your path:
Greydon Gilmore
Last updated on Feb 1, 2022
Adding application launch icon to favorites
Download your own icon image Find path to the executable of your application by running (replace brackets with name of applicaion): which [name_application] Copy the path from this output.
Greydon Gilmore
Last updated on Feb 1, 2022
Install Advanced Normalization Tools
Get the latest ANTs code Download the latest code into an arbitrary directory, I use ~/code: mkdir ~/code cd ~/code git clone https://github.com/ANTsX/ANTs.git You will also need to install the ZLIB libraries:
Greydon Gilmore
Last updated on Feb 1, 2022
SSHFS Desktop Application
Setup fuse Run the following in a terminal: modprobe fuse Create a FUSE usergroup and add yourself to the group sudo groupadd fuse sudo usermod -a -G fuse $USER Create a set of ssh-keys, press enter when asked to name the file (blank) and press enter when asked to enter a passphrase (blank):
Greydon Gilmore
Last updated on Feb 1, 2022
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